X1 Bioinformatics Workstation

One-click, end-to-end bioinformatics—ready to run, easy to deploy.

From Sequencing Data to Actionable Reports

X1 Bioinformatics Workstation is an integrated bioinformatics solution, designed to streamline sequencing data analysis from raw data to application-ready reports. Featuring flexible hardware configurations and pre-built bioinformatics pipelines, it delivers plug-and-run, end-to-end data analysis for diverse laboratory throughput needs.

X1 requires no complicated deployment or professional bioinformatics setup, allowing one-click standardized analysis to cut hands-on work, shorten turnaround time, boost data security and deliver actionable sequencing results faster.

Bioinformatics Built for Every Workflow

X1 brings together ready-to-use analysis, real-time monitoring, and secure data management—streamlining sequencing workflows for diverse laboratory needs.

Versatile

Unlock multiple applications via integrated bioinformatics software

One-stop, plugin-based bioinformatics workflows—covering QC, assembly, and variant calling. Designed for diverse applications, it integrates premier databases to precisely annotate over 20,000 human genes and 38,000 microbes.

Ready-to-Use

Intuitive Interface that Eliminates Complex Bioinformatics Barriers

Automated Run: Paired with Cygnus sequencer platform, data automatically triggers analysis upon sequencing completion.
Custom Workflow: Supports data import and manual task creation with customizable parameters.

One-click task creation in the X1 analysis software

Custom analysis task with editable run and sample parameters

Status Monitoring

Real-time status monitoring with instant alerts to prevent storage overflow

Live dashboard for task status, storage, and system usage

Highly Scalable

Comprehensive NGS platform support with versatile expansion

Data Management: Supports seamless data operations, including upload, download, back up, and delete with ease.
Plugin Management: Provides full lifecycle control, including install, uninstall, configure, and upgrade pipelines on demand.

Analysis data management with export and delete

Plugin list for installing, configuring, and upgrading pipelines

Data Security

Secure analysis in fully air-gapped environments.

Designed for reliable operation in fully air-gapped environments, the solution safeguards the privacy and security of hospital data. It also helps healthcare institutions build and manage their data assets systematically, enabling secure, controlled analysis that supports high-quality research.

One Platform. Every Step of Discovery.

Multiomics Discovery

Explore transcriptomic, proteomic, epigenomic, and genomic data alongside single-cell and spatial datasets in one visual workspace. X1 Platform helps researchers connect findings across modalities.

Population Genomics

BioInsight Platform supports population-scale studies, from cohort sequencing and joint variant calling to large-scale analysis. Elastic computing, iterative genotyping, and local data residency help meet the needs of national programs and biobanks.

Pathogen Detection

Integrated software enables accurate pathogen identification, classification, and tracing, with real-time monitoring of infectious disease trends. End-to-end workflows cover mNGS/tNGS, norovirus detection, and TB/HIV drug-resistance analysis, supported by 38,000+ species annotations and VFDB, CARD, and KEGG analyses.

Genetic Disease Analysis

Combining high-throughput sequencing and targeted capture, the CYGNUS X1 Bioinformatics Workstation supports efficient analysis of disease-associated genes listed in OMIM. Automated database updates help keep variant interpretation current, supporting genetic risk assessment, diagnosis, and research.

Drug discovery

An end-to-end service for pharmacogenomic testing and analysis helps identify genetic predispositions and flag potential disease risks early, while guiding the optimization of health management plans. Precision testing enables more targeted prevention and a new approach to health management.

Speak to our specialist

Tell us about your sequencing needs. Our team will be in touch to discuss suitable platforms, applications, and support for your work.